Tropical Medicine and Health
Online ISSN : 1349-4147
Print ISSN : 1348-8945
ISSN-L : 1348-8945

この記事には本公開記事があります。本公開記事を参照してください。
引用する場合も本公開記事を引用してください。

Positive Diversifying Selection on the Plasmodium falciparum surf4.1 Gene in Thailand
Phonepadith XangsayarathMorakot KaewthamasornKazuhide YahataShusuke NakazawaJetsumon SattabongkotRachanee UdomsangpetchOsamu Kaneko
著者情報
ジャーナル フリー 早期公開

論文ID: 2012-12

この記事には本公開記事があります。
詳細
抄録
Plasmodium falciparum SURFIN4.1 is a type I transmembrane protein thought to locate on the merozoite surface and to be responsible for a reversible adherence to the erythrocyte before invasion. In this study, we evaluated surf4.1 gene segment encoding extracellular region for polymorphism, the signature of positive selection, the degree of linkage disequilibrium, and temporal change in allele frequency distribution in P. falciparum isolates from Thailand in 1988–89, 2003, and 2005. We found that SURFIN4.1 is highly polymorphic, particularly at the C-terminal side of the variable region located just before a predicted transmembrane region. A signature of positive diversifying selection on the variable region was detected by multiple tests and, to a lesser extent, on conserved N-terminally located cysteine-rich domain by Tajima’s D test. Linkage disequilibrium between sites over a long distance (> 1.5 kb) was detected, and multiple SURFIN4.1 haplotype sequences detected in 1988/89 still circulated in 2003. Few of the single amino acid polymorphism allele frequency distributions were significantly different between the 1988/89 and 2003 groups, suggesting that the frequency distribution of SURFIN4.1 extracellular region remained stable over 14 years.
引用文献 (26)
著者関連情報
© 2012 by The Japanese Society of Tropical Medicine
feedback
Top